Software used in the project

Hardware

Data for the project is generated using one ABI Prism 3730xl capillary DNA sequencer.


The sequencing data is processed and analysed on a updated Jseq computer cluster consisting of two AMD and two intel machines:
GENBASE (Intel Pentium4 3.4 GHz LGA , 3 GB RAM),
- Genome assembly, mySQL database server, web server,
GENWORKWIN (Intel Pentium4 3.2 GHz LGA, 1 GB RAM),
- Win 2000 SP4, databases monitoring by the means of MS Access 2000)
John (AMD Athlon MP 1700+ Dual),
JBLSEQDAT
(AMD Athlon 700 MHz). - firewall
Two AMD and one Intel machine are running Linux Mandriva operating system